Software, Resources & GWAS Sumstats


MAGMA is a tool for gene analysis and generalized gene-set analysis of GWAS data. It can be used to analyse both raw genotype data as well as summary SNP p-values from a previous GWAS or meta-analysis.

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LAVA is a tool to conduct genome-wide, local genetic correlation analysis on multiple traits, using GWAS summary statistics as input.

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Multivariate GWAS

Use the provided simulation script to compare the Type I error rate and power between multiple multivariate genome-wide association tests.

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